Publications

2010

  1. Bernstam EV, Smith JW, Johnson TR. What is biomedical informatics? J Biomed Inform. 2010 Feb;43(1):104-10. Epub 2009 Aug 13. Review.
    PMID: 19683067 [PubMed - indexed for MEDLINE].

2009

  1. Akcakanat A, Zhang L, Tsavachidis S, Meric-Bernstam F. (2009) The rapamycin-regulated gene expression signature determines prognosis for breast cancer. Mol Cancer. 2009 Sep 24;8:75. PMID: 19778445.
  2. Bernstam EV, Hersh WR, Johnson SB, Chute CG, Nguyen H, Sim I, Nahm M, Weiner M, Miller P, DiLaura RP, Overcash M, Lehmann HP, Eichmann D,  Athey BD, Scheuermann RH, Anderson N, Starren JB, Harris PA, Smith JW, Barbour E, Silverstein JC, Krusch DA, Nagarajan R and Becich MJ, CTSA Biomedical Informatics key Function Committee. Synergies and Distinctions between Computational Disciplines in  Biomedical Research: Perspective from the Clinical and Translational  Science Award Programs.Acad Med. 2009 Jul;84(7):964-70. Review.[ PMID: 19550198] [PubMed - indexed for MEDLINE].
  3. Mirhaji P, Zhu M, Vagnoni M, Bernstam EV, Zhang J, Smith JW. (2009)  Ontology driven integration platform for clinical and translational research.1: BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S2. [PMID: 19208190].
  4. Nelson S, Hwang KO, Bernstam EV. (2009) Comparing clinician knowledge and online information regarding Alli (Orlistat). nt J Med Inform. 2009 Nov;78(11):772-7. Epub 2009 Aug 28. [PMID: 19716762.].
  5. Tanaka LY, Herskovic JR, Iyengar MS, Bernstam EV. Sequential result refinement for searching the biomedical literature. J Biomed Inform. 2009 Aug;42(4):678-84. Epub 2009 Mar 9. [PMID: 19272463] [PubMed - indexed for MEDLINE].
  6. Willcockson IU, Johnson CW, Hersh W, Bernstam EV. Predictors of student success in graduate biomedical informatics training: introductory course and program success. J Am Med Inform Assoc. 2009 Nov-Dec;16(6):837-46. Epub 2009 Aug 28. [PMID: 19717804] [PubMed - indexed for MEDLINE].

2008

  1. Bernstam EV, Walji MF, Sagaram S, Sagaram D, Johnson CW, Meric-Bernstam F. Commonly cited Web site quality criteria are not effective at identifying inaccurate online information about breast cancer. Cancer, 2008 Mar 15;112(6):1206-13. [PMID: 18266210].
  2. Freire P, Vilela M, Deus HF, Kim YW, Koul D, Colman H, Aldape KD, Bogler O, Yung WKA, Coombes K, Mills GB, Vasconcelos AT, Almeida JS(2008) Exploratory Analysis of the Copy Number Alterations in Glioblastoma Multiforme. PLoS ONE 3(12): e4076 doi:10.1371/journal.pone.0004076. [PMID 19115005].
  3. Stanislaus R, Carey M, Deus HF, Coombes K, Hennessy BT, Mills GB, Almeida JS. (2008) RPPAML/RIMS: A meta data format and an information management system for Reverse Phase Protein Arrays. BMC Bioinformatics 9(1):555. [PMID: 19102773].

2007

  1. Bernstam EV, Herskovic JR., Aphinyanaphongs Y, Aliferis CF, Sriram MG, Hersh WR. (2006) Using citation data to improve retrieval from MEDLINE. J Am Med Inform Assoc 2006 Jan-Feb;13(1):96-105. [PMID: 16221938].
  2.  Herskovic JR, Iyengar SM, Bernstam EV. (2007) Using hit curves to compare search algorithm performance. J Biomed Inform 2007 Apr;40(2):93-9. [PMID: 16469545]
  3. Herskovic JR, Tanaka LY, Hersh WR, Bernstam EV.(2007) A day in the Life of PubMed: Analysis of a Typical Day's Query Log. J Am Med Inform Assoc 2007,Mar-Apr;14(2):212-20. [PMID: 17213501].
  4. Hwang KO, Farheen K, Johnson CW, Thomas EJ, Barnes AS, Bernstam EV.(2007) Quality of weight loss advice on internet forums. Am J Med 2007 Jul;120(7):604-9. [PMID: 17602934]

 

2006

  1. Bernstam E.V., Herskovic J. R, Aphinyanaphongs Y., Aliferis C. F., Sriram M. G., Hersh W. R. (2006) Using citation data to improve retrieval from MEDLINE. J Am Med Inform Assoc, 2006; Jan-Feb; 12(1):96-105. [PMID: 16221938].

 

2005

  1. Herskovic JR, Bernstam EV. (2005) Using Incomplete Citation Data for MEDLINE Results Ranking. Proc AMIA Symp, 2005 ; 316-20. [PMID: 16779053].